Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917123.1_cds_XP_016466777.1_59594
CDS Infomation

[gene=LOC107789471] [db_xref=GeneID:107789471] [protein=bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial] [protein_id=XP_016466777.1] [location=join(1961..2209,2309..2374,3545..3739,3840..3950,4939..5030,7492..7584,8637..8694,8777..8890,9327..9424,9979..10183)] [gbkey=CDS]
Sequence

ATGTTGAGTTGCCAATGGAGCAGCAGCTTCACTAGAGTATGCTACAGTTCACCATTTCCC
TCGCAGCAATTTAATAATAAGGCGTTAAACTTGAACAGACACTGTTCCCTTACCAAATCA
TCTATGGAGGATTCCAGTTCTCAGGTTTCGCAATCGCTCTTTCAATTTCTCACAAAGAAG
CCTTACGAGCCTCCTCAATGGGCCTCTCATCTTAGCCCCCTTCCCTCTCACACTTTTTCC
CTTGGACATTTTCCGACTCCAATTCACAAGTGGAACCTGCCTAATTTGCCCAAGGACACT
GAGGTTTGGTTAAAGCGTGATGATATATCAGGAATGCAGTTGAGTGGAAACAAGGTCAGG
AAGCTAGAGTTCTTGTTGGGAGATGCTGTGGCACAGGGGGCTGACTGCATAGTAACTATA
GGTGGCATACAAAGTAATCACTGCCGTGCTACTGCTGTCGCTTCCAAGTACATAAACCTT
GACTGTTATCTCATCTTACGCACTTCAAAGTTGCTTGTGGATAAAGATCCTGGATTGATA
GGGAACCTCCTTGTTGAGCGATTAGTTGGAGCGCACATCGATCTTGTCTCAAAAGAAGAA
TATGCAAAAGTTGGCAGTGAGGCTCTTACCAAATTATTGAAAGAAAAGCTGTTAAATGAA
GGAAGAAAGCCGTATGTCATCCCTGTTGGTGGATCCAATTCTTTAGGAACCTGGGGCTAT
ATTGAAGCAATCCGGGAAGTTGAGCAACAACTTCAGCACTCAAGCAGTGAATGGAAATTC
GATGACATTGTTGTAGCTTGTGGCAGTGGGGGTACAGTCGCTGGTTTGTCAATTGCATCC
AGGCTCAGTGGCTTGAAAGCAAAAGTTAATGCATTTTGTGTTTGTGACGATCCGGATTAT
TTTTATGAATATGTTCAAGGCCTACTTGATGGAATTAATGCAGGCGTCAGCTCACGTGAT
ATTGTTAGCATTCAAAATGCGAAAGGCCTTGGGTATGCTATGAGCACAGCTGACGAGCTT
AAATTTGTGAAGCAAGTTGCTGAAGCCACAGGTGTTATTCTCGACCCTGTCTACAGTGGT
AAAGCAGCTTATGGAATGATAAAAGACATGAACGAGAATCCAACAAAGTGGGAGGGAAGA
AAGATTCTCTTCATACATACAGGTGGCCTACTGGGTTTATATGACAAAGCTGATGAAATG
GCCTCATTAATGGGCAAATGGCGTAAGATGGATATCAATGAATCTATCCCAAGACAAGAC
GGCATCGGCAAAATGTTCTAA

Peptide Sequence

PEP ID

XP_016466777.1
PEP Infomation

PREDICTED: bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial [Nicotiana tabacum]
Sequence

MLSCQWSSSFTRVCYSSPFPSQQFNNKALNLNRHCSLTKSSMEDSSSQVSQSLFQFLTKK
PYEPPQWASHLSPLPSHTFSLGHFPTPIHKWNLPNLPKDTEVWLKRDDISGMQLSGNKVR
KLEFLLGDAVAQGADCIVTIGGIQSNHCRATAVASKYINLDCYLILRTSKLLVDKDPGLI
GNLLVERLVGAHIDLVSKEEYAKVGSEALTKLLKEKLLNEGRKPYVIPVGGSNSLGTWGY
IEAIREVEQQLQHSSSEWKFDDIVVACGSGGTVAGLSIASRLSGLKAKVNAFCVCDDPDY
FYEYVQGLLDGINAGVSSRDIVSIQNAKGLGYAMSTADELKFVKQVAEATGVILDPVYSG
KAAYGMIKDMNENPTKWEGRKILFIHTGGLLGLYDKADEMASLMGKWRKMDINESIPRQD
GIGKMF

Transcript Sequence

Gene sequence data has not been registered.